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2023 Publications
Ahmad HMN, Andrade A, Song E. .Biosensors (Basel). 2023 Nov 13;13(11). doi: 10.3390/bios13110983. PubMed PMID: 37998158; PubMed Central PMCID: PMC10669129.
Bubli SY, Smolag M, Blackwell E, Lin YC, Tsavalas JG, Li L. . Sci Rep. 2023 Sep 9;13(1):14896. doi: 10.1038/s41598-023-41947-z. PubMed PMID: 37689784; PubMed Central PMCID: PMC10492858.
Fleck K, McNutt S, Chu F, Jeffers V. .mBio. 2023 Jun 23:e0357322. doi: 10.1128/mbio.03573-22. Epub ahead of print. PMID: 37350586.
Tripathi S, Cote RH, Vashisth H. .Protein Sci. 2023 Aug;32(8):e4720. doi: 10.1002/pro.4720. PMID: 37407431; PMCID: PMC10367598.
Peng YJ, Nanduri J, Wang N, Kumar GK, Bindokas V, Paul BD, Chen X, Fox AP, Vignane T, Filipovic MR, Prabhakar NR. . Sci Adv. 2023 Jul 7;9(27):eadf3026. doi: 10.1126/sciadv.adf3026. Epub 2023 Jul 5. PMID: 37406126; PMCID: PMC10321732.
Zayka P, Parr B, Robichaud H, Hickey S, Topping A, Holt E, Watts DBE, Soto N, Stein DC, DeShong P, Hurley M. . Soft Matter. 2023 Feb 15;19(7):1429-1439. doi: 10.1039/d2sm01205g. PMID: 36723251.
Moser B, Moore D, Khadka B, Lyons C, Foxall T, Andam CP, Parker CJ, Ochin C, Garelnabi M, Sevigny J, Thomas WK, Bigornia S, Dao MC. . Front Nutr. 2023 Jan 6;9:1059163. doi: 10.3389/fnut.2022.1059163. PMID: 36687728; PMCID: PMC9852993.
2022 Publications
Irwin, M. J., et al. (2022). "Reconstitution of membrane-associated components of a G-protein signaling pathway on membrane-coated nanoparticles (lipobeads)." bio-protocol 12(2): e4303.
Sreter, J.A., Foxall, T.L., Varga, K. (2022). . Biomolecules, 12(5): 669.
Spurgeon ME, Cheng J, Ward-Shaw E, Dick FA, DeCaprio JA, Lambert PF. . PLoS Pathog. 2022 May 13;18(5):e1010551. doi: 10.1371/journal.ppat.1010551. PMID: 35560034; PMCID: PMC9132321.
Panahi Z, Ren T, Halpern JM. . ACS Appl Mater Interfaces. 2022 Aug 2. doi: 10.1021/acsami.2c07701. Epub ahead of print. PMID: 35918826.
Andrzejczyk J, Jovic K, Brown LM, Pascetta VG, Varga K, Vashisth H. . Proteins. 2022 Nov;90(11):1896-1907. doi: 10.1002/prot.26385. Epub 2022 Jun 3. PMID: 35567429; PMCID: PMC9347825.
Edwards SD, Hou S, Brown JM, Boudreau RD, Lee Y, Kim YJ, Jeong KJ. . ACS Appl Bio Mater. 2022 May 16. doi: 10.1021/acsabm.2c00214. Epub ahead of print. PMID: 35576622.
Matissek SJ, Karbalivand M, Han W, Boutilier A, Yzar-Garcia E, Kehoe LL, Gardner DS, Hage A, Fleck K, Jeffers V, Rajsbaum R, Elsawa SF. . Oncotarget. 2022 Aug 3;13:944-959. doi: 10.18632/oncotarget.28261. PMID: 35937499; PMCID: PMC9348707.
Nadar, P.M., Merrill, M.A., Austin, K. et al. . Transl Psychiatry 12, 372 (2022).
Boutilier AJ, Huang L, Elsawa SF. . Int J Mol Sci. 2022 Sep 22;23(19):11145. doi: 10.3390/ijms231911145. PMID: 36232447; PMCID: PMC9569492.
Robison, C. L., Cova, N., Madore, V., Allen, T., Barrett, S., & Charntikov, S. (2022, October 21). . bioRxiv. Retrieved October 25, 2022, from
T. Ren, S.E. Bramlitt, J.M.J. Lafreniere, W.R. Seitz, J.M. Halpern§. “Conformation-Based Stimuli-Response Sensors: Strategies for Optimizing Electrochemical and FRET Transduction”, Sensors and Actuators Reports. 3, (2021), 100066. doi: 10.1016/j.snr.2021.100066
Fleck K, Nitz M, Jeffers V (2021) “Reading” a new chapter in protozoan parasite transcriptional regulation. PLOS Pathogens 17(12): e1010056.
Joh, YA, Kwon, YH, Tannir, S, Leonard, BM, Kubelka, J, Varga, K, and Balaz, M; The effect of molecular isomerism on the induced circular dichroism of cadmium sulfide quantum dots. J Mater Chem C (2021), 9: 17483-17495.
Z. Panahi, L. Custer, J. M. Halpern, Recent advances in non-enzymatic electrochemical detection of hydrophobic metabolites in biofluids. Sensors and Actuators Reports. 3 (2021), doi:10.1016/j.snr.2021.100051.
Cote, Rick H.; Gupta, Richa; Irwin, Michael J.; and Wang, Xin, "Photoreceptor phosphodiesterase (PDE6): structure, regulatory mechanisms, and implications for treatment of retinal diseases" (2021). Adv Exp Med Biol. Protein Reviews. 1236.
"Stanley G. Feeney, Joelle M. J. LaFreniere, Jeffrey Mark Halpern, Perspective on Nanofiber Electrochemical Sensors: Design of Relative Selectivity Experiments Polymers (Basel) 2021 Nov; 13(21): 3706. Published online 2021 Oct 27. doi: 10.3390/polym13213706 PMCID: PMC8588248"
Cheng, MLH, Lippmann, TC, Dijkstra, JA, Bradt, G, Cook, S, Choi, J-G, Brown, BL. (2021). A Deposition Baseline for Microplastic Particle Distribution in an Estuary. Marine Pollution Bulletin. 170. doi: 10.1016/j.marpolbul.2021.112653.
Maran SR, Fleck K, Monteiro-Teles NM, Isebe T, Walrad P, Jeffers V, Cestari I, Vasconcelos EJR, Moretti N. Protein acetylation in the critical biological processes in protozoan parasites. Trends Parasitol. 2021 Sep;37(9):815-830. doi: 10.1016/j.pt.2021.04.008. Epub 2021 May 12. PMID: 33994102.
Boutilier AJ, Elsawa SF. Macrophage Polarization States in the Tumor Microenvironment. Int J Mol Sci. 2021 Jun 29;22(13):6995. doi: 10.3390/ijms22136995. PMID: 34209703; PMCID: PMC8268869.
Nadide Altincekic, Sophie M., Korn, Nusrat S. Qureshi et al., Large-scale recombinant production of the SARS-CoV-2 proteome for high-throughput and structural biology applications. Front. Mol. Biosci. 8:653148 (2021), doi:10.3389/fmolb.2021.653148.
E.C. Yip, I. Miko, J.M. Ulmer, N.A. Cherim, M.A. Townley, S. Poltak, A.M. Helms, C.M. De Moraes, M.C. Mescher & J.F. Tooker (2021). Giant polyploid epidermal cells and male pheromone production in the tephritid fruit fly Eurosta solidaginis (Diptera: Tephritidae). Journal of Insect Physiology 130: 104210. DOI: 10.1016/j.jinsphys.2021.104210
LaFreniere JMJ, Roberge EJ, Ren T, Seitz WR, Balog ERM, Halpern JM. Insights on the Lower Critical Solution Temperature Behavior of pNIPAM in an Applied Electric Field. ECS Trans. 2020;97(7):709-715. doi: 10.1149/09707.0709ecst. PMID: 33796207; PMCID: PMC8011545.
Ziino ER, Marnoto S, Halpern JM. Investigation to Minimize Electrochemical Impedance Spectroscopy Drift. ECS Trans. 2020;97(7):737-745. doi: 10.1149/09707.0737ecst. PMID: 33777309; PMCID: PMC7996669.
Liu Y, Vashisth, H. Allosteric Pathways Originating at Cysteine Residues in Regulators of G-protein Signaling Proteins Biophys. J. 120:517-526 (2021); doi: 10.1016/ j.bpj.2020.12.010
Hart E, Hertia D, Barrett ST, Charntikov S. Varenicline rescues nicotine-induced decrease in motivation for sucrose reinforcement. BEHAVIOURAL BRAIN RESEARCH 397 Article number ARTN 112887 15 Jan 2021 doi:10.1016/j.bbr.2020.112887
Ahmad HMN, Dutta G, Csoros J, Si B, Yang R, Halpern JM, Seitz WR, Song E. Stimuli-Responsive Templated Polymer as a Target Receptor for a Conformation-based Electrochemical Sensing Platform. ACS Appl Polym Mater. 2021 Jan 8;3(1):329-341. doi: 10.1021/acsapm.0c01120. Epub 2020 Dec 9. PMID: 33748761; PMCID: PMC7971449.
Panahi, Z., Merrill, M. A.; Halpern, J. M. (2020). Reusable Cyclodextrin-Based Electrochemical Platform for Detection of trans-Resveratrol. ACS Applied Polymer Materials. doi:10.1021/acsapm.0c00866
Nadide Altincekic, Sophie M., Korn, Nusrat S. Qureshi et al., Large-scale recombinant production of the SARS-CoV-2 proteome for high-throughput and structural biology applications. Front. Mol. Biosci. 8:653148 (2021), doi:10.3389/fmolb.2021.653148.
E.C. Yip, I. Miko, J.M. Ulmer, N.A. Cherim, M.A. Townley, S. Poltak, A.M. Helms, C.M. DeMoraes, M.C. Mescher & J.F. Tooker (2021). Giant polyploid epidermal cells and male pheromone production in the tephritid fruit fly Eurosta solidaginis (Diptera: Tephritidae). Journal of Insect Physiology 130: 104210. DOI: 10.1016/j.jinsphys.2021.104210
LaFreniere JMJ, Roberge EJ, Ren T, Seitz WR, Balog ERM, Halpern JM. Insights on the Lower Critical Solution Temperature Behavior of pNIPAM in an Applied Electric Field. ECS Trans. 2020;97(7):709-715. doi: 10.1149/09707.0709ecst. PMID: 33796207; PMCID: PMC8011545.
Ziino ER, Marnoto S, Halpern JM. Investigation to Minimize Electrochemical Impedance Spectroscopy Drift. ECS Trans. 2020;97(7):737-745. doi: 10.1149/09707.0737ecst. PMID: 33777309; PMCID: PMC7996669.
Liu Y, Vashisth, H. Allosteric Pathways Originating at Cysteine Residues in Regulators of G-protein Signaling Proteins Biophys. J. 120:517-526 (2021); doi: 10.1016/ j.bpj.2020.12.010
Hart E, Hertia D, Barrett ST, Charntikov S. Varenicline rescues nicotine-induced decrease in motivation for sucrose reinforcement. BEHAVIOURAL BRAIN RESEARCH 397 Article number ARTN 112887 15 Jan 2021 doi:10.1016/j.bbr.2020.112887
Ahmad HMN, Dutta G, Csoros J, Si B, Yang R, Halpern JM, Seitz WR, Song E. Stimuli-Responsive Templated Polymer as a Target Receptor for a Conformation-based Electrochemical Sensing Platform. ACS Appl Polym Mater. 2021 Jan 8;3(1):329-341. doi: 10.1021/acsapm.0c01120. Epub 2020 Dec 9. PMID: 33748761; PMCID: PMC7971449.
Matissek, SJ, Han, W, Hage, A, Karbalivand, M, Rajsbaum, R and Elsawa, SF (2020). A novel mechanism of regulation of the transcription factor GLI3 by toll-like receptor signaling. JLB. (submitted; BioRxiv DOI:10.1101/2021.01.01.424866).
Matissek SJ, Han W, Karbalivand M, Sayed M, Reilly BM, Mallat S, Ghazal SM, Munshi M, Yang G, Treon SP, Walker SR, Elsawa SF. Epigenetic targeting of Waldenström macroglobulinemia cells with BET inhibitors synergizes with BCL2 or histone deacetylase inhibition. Epigenomics Epigenomics. 2021 Jan; 13(2): 129–144. Published online 2020 Dec 24. doi: 10.2217/epi-2020-0189
Nordyke, CT.; Ahmed, YM.; Puterbaugh, RZ.; Bowman, GR.; Varga, K; Intrinsically Disordered Bacterial Polar Organizing Protein Z, PopZ, Interacts with Protein Binding Partners Through an N-terminal Molecular Recognition Feature, Journal of molecular biology 432(23):6092-6107 Nov 2020 doi: 10.1016/j.jmb.2020.09.020.
Robison, C. L., Kazan, T., Miller, R., Cova, N., & Charntikov, S. (2020). Inactivation of posterior but not anterior dorsomedial caudate-putamen impedes learning with self-administered nicotine stimulus. BioRxiv.
Yang J, Qiu L, Strobel M, Kabel A, Zha X, and Chen X. Acid-Sensing Ion Channels Mediate Type III Adenylyl Cyclase-Independent Acid-Sensing of Mouse Olfactory Sensory Neurons. Mol Neurobiol. 2020 Jul;57(7):3042-3056. doi: 10.1007/s12035-020-01943-0. Epub 2020 May 26.
Toran PT, Wohlfahrt M, Foye J, Kiem HP, Wojchowski DM. Assessment and streamlined preparation of low-cytotoxicity lentiviral vectors for mobilized human hematopoietic stem cell transduction. Exp Hematol. 2020 Jun;86:28-42.e3. doi: 10.1016/j.exphem.2020.05.009. Epub 2020 May 27. PubMed PMID: 32473295; PubMed Central PMCID: PMC7372909.
Irwin MJ, Gupta R, Gao XZ, Cahill KB, Chu F, Cote RH. . J Biol Chem. 2019 Nov 5;. doi: 10.1074/jbc.RA119.011002. [Epub ahead of print] PubMed PMID: 31690623.
Shaw VS, Mohammadi M, Quinn JA, Vashisth H, Neubig RR. .Mol Pharmacol. 2019 Sep 22;. doi: 10.1124/mol.119.117176. [Epub ahead of print] PubMed PMID: 31543506.
Chu F, Hogan D, Gupta R, Gao XZ, Nguyen HT, Cote RH. . J Mol Biol. 2019 Sep 6;431(19):3677-3689. doi: 10.1016/j.jmb.2019.07.035. Epub 2019 Aug 5. PubMed PMID: 31394113; PubMed Central PMCID: PMC6733632.
Stafford NP, Kazan TN, Donovan CM, Hart EE, Drugan RC, Charntikov S. .Front Behav Neurosci. 2019;13:134. doi: 10.3389/fnbeh.2019.00134. eCollection 2019. PubMed PMID: 31293400; PubMed Central PMCID: PMC6603087.
Wang X, Plachetzki DC, Cote RH. J Biol Chem. 2019 May 24;294(21):8351-8360. doi: 10.1074/jbc.RA119.007520. Epub 2019 Apr 8. PubMed PMID: 30962282; PubMed Central PMCID: PMC6544851.
Kazan T, Charntikov S. . Neuropharmacology. 2019 Apr;148:139-150. doi: 10.1016/j.neuropharm.2018.12.031. Epub 2019 Jan 3. PubMed PMID: 30611697; PubMed Central PMCID: PMC6457454.
Park S, Edwards S, Hou S, Boudreau R, Yee R, Jeong KJ. . Biomaterials science. 2019 March 26;7(4):1276-1280. PubMed PMID: 30672521; PubMed Central PMCID: PMC6435401
Zhou Y, Qiu L, Sterpka A, Wang H, Chu F, Chen X. . Frontiers in cellular neuroscience. 2019 February 13;13:34. PubMed PMID: 30814930;
PubMed Central PMCID: PMC6381875.
Mohammadi M, Mohammadiarani H, Shaw VS, Neubig RR, Vashisth H. . Proteins. 2019 February;87(2):146-156. PubMed PMID: 30521141; PubMed Central PMCID: PMC6387623.
Sterpka A, Chen X. .Pharmacol Res. 2018 Nov;137:114-121. doi: 10.1016/j.phrs.2018.10.002. Epub 2018 Oct 4. Review. PubMed PMID: 30291873; PubMed Central PMCID: PMC6410375.
G. Thompson, S. Marnoto, and J.M. Halpern. "." Electrochemical Society Transactions. 80 (2017) 1177-1187.